SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122900394
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Control
Genomic region: chr11:119081594-119095420
Size: 13826
Super-enhancer rank 394
Number of SE elements: 1
ChIP density(Case|Control): 28415.1952|1682.6242
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HMBS ;
ROSE Overlap HMBS ; VPS11 ; H2AFX ;
ROSE Proximal HINFP ; C2CD2L ; DPAGT1 ; HMBS ; HYOU1 ;
ROSE Closest HMBS ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ABCG4 ; SLC37A4 ; HINFP ; CCDC84 ; PDZD3 ; HYOU1 ; VPS11 ; NLRX1 ; HMBS ; TRAPPC4 ; RPL23AP64 ; DPAGT1 ; C2CD2L ; MIR3656 ; H2AFX ; RPS25 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122900394 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers