SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122900386
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Control
Genomic region: chr1:160990182-161028856
Size: 38674
Super-enhancer rank 386
Number of SE elements: 22
ChIP density(Case|Control): 31666.2712|4555.7972
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: F11R ;
ROSE Overlap F11R ;
ROSE Proximal ARHGAP30 ; TSTD1 ; USF1 ; ITLN2 ;
ROSE Closest F11R ;
Lasso PFDN2 ; USP21 ; F11R ; USF1 ; NIT1 ; DEDD ; MPZ ; KLHDC9 ; TSTD1 ;
PreSTIGE ;
ABC F11R ; USF1 ;
BETA USF1 ; TSTD1 ; PVRL4 ; ITLN2 ; F11R ; ARHGAP30 ; KLHDC9 ; LOC101928372 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122900386 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers