SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_122900324
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Control
Genomic region: chr22:21624423-21630129
Size: 5706
Super-enhancer rank 324
Number of SE elements: 1
ChIP density(Case|Control): 34653.1086|4779.3456
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: YDJC ;
ROSE Overlap YDJC ;
ROSE Proximal MIR301B ; MIR130B ; CCDC116 ; SDF2L1 ; PPIL2 ;
ROSE Closest YDJC ;
Lasso ;
PreSTIGE ;
ABC ;
BETA UBE2L3 ; PPIL2 ; CCDC116 ; MIR301B ; RIMBP3B ; MIR130B ; RIMBP3C ; SDF2L1 ; YDJC ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122900324 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers