SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_122900185
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Control
Genomic region: chr4:1848697-1915596
Size: 66899
Super-enhancer rank 185
Number of SE elements: 37
ChIP density(Case|Control): 48194.0396|8629.971
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: WHSC1 ;
ROSE Overlap WHSC1 ; LETM1 ;
ROSE Proximal ;
ROSE Closest WHSC1 ;
Lasso WHSC1 ; LETM1 ;
PreSTIGE ;
ABC LETM1 ; FGFR3 ; TACC3 ; TMEM129 ; NAT8L ; C4orf48 ; NELFA ; FAM53A ; LOC100130872 ;
BETA FGFR3 ; WHSC1 ; LETM1 ; SCARNA22 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122900185 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers