SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_122900089
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Control
Genomic region: chr3:47656583-47805326
Size: 148743
Super-enhancer rank 89
Number of SE elements: 67
ChIP density(Case|Control): 78744.5442|23308.0281
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SMARCC1 ;
ROSE Overlap DHX30 ; SMARCC1 ;
ROSE Proximal MIR1226 ;
ROSE Closest SMARCC1 ;
Lasso MAP4 ; PTPN23 ; DHX30 ; ELP6 ; SMARCC1 ;
PreSTIGE ;
ABC SMARCC1 ;
BETA DHX30 ; SMARCC1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122900089 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers