SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122301175
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: KMS28BM
Genomic region: chrX:49155739-49174025
Size: 18286
Super-enhancer rank 1175
Number of SE elements: 4
ChIP density(Case|Control): 15786.3038|1367.7928
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MAGIX ;
ROSE Overlap PLP2 ; MAGIX ;
ROSE Proximal PRICKLE3 ; SYP-AS1 ; GPKOW ; SYP ;
ROSE Closest MAGIX ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MAGIX ; CACNA1F ; PRAF2 ; CCDC22 ; FOXP3 ; WDR45 ; PLP2 ; PRICKLE3 ; GPKOW ; SYP ; SYP-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122301175 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers