SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122301130
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: KMS28BM
Genomic region: chr10:103466712-103485693
Size: 18981
Super-enhancer rank 1130
Number of SE elements: 5
ChIP density(Case|Control): 17394.1884|2509.2882
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CALHM3 ;
ROSE Overlap CALHM3 ; NEURL1-AS1 ;
ROSE Proximal NEURL1 ; CALHM2 ; CALHM1 ;
ROSE Closest CALHM3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR1307 ; CALHM2 ; USMG5 ; NEURL1-AS1 ; CALHM3 ; PDCD11 ; CALHM1 ; NEURL1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122301130 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers