SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_122301003
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: KMS28BM
Genomic region: chr12:54277858-54284513
Size: 6655
Super-enhancer rank 1003
Number of SE elements: 3
ChIP density(Case|Control): 17486.678|1208.548
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HNRNPA1;
ROSE Overlap CBX5; HNRNPA1;
ROSE Proximal COPZ1; CBX5; NFE2; MIR3198-2;
ROSE Closest HNRNPA1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122301003 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers