SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_122300784
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: KMS28BM
Genomic region: chr20:63726773-63739575
Size: 12802
Super-enhancer rank 784
Number of SE elements: 2
ChIP density(Case|Control): 20993.9998|1684.7432
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LIME1 ;
ROSE Overlap ZGPAT ; LIME1 ;
ROSE Proximal ZGPAT ; SLC2A4RG ; TNFRSF6B ; ARFRP1 ;
ROSE Closest LIME1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TNFRSF6B ; ZBTB46-AS1 ; STMN3 ; ARFRP1 ; ZGPAT ; RTEL1 ; SLC2A4RG ; RTEL1-TNFRSF6B ; LIME1 ; ZBTB46 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122300784 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers