SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122300654
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: KMS28BM
Genomic region: chr19:46713349-46720052
Size: 6703
Super-enhancer rank 654
Number of SE elements: 2
ChIP density(Case|Control): 22810.309|1165.6517
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRKD2 ;
ROSE Overlap PRKD2 ; STRN4 ;
ROSE Proximal FKRP ; MIR320E ;
ROSE Closest PRKD2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PRKD2 ; SLC1A5 ; MIR320E ; STRN4 ; PTGIR ; DACT3 ; DACT3-AS1 ; FKRP ; GNG8 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122300654 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers