SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_122300499
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: KMS28BM
Genomic region: chr9:124197325-124224546
Size: 27221
Super-enhancer rank 499
Number of SE elements: 8
ChIP density(Case|Control): 29425.901|3819.1063
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NEK6 ;
ROSE Overlap ;
ROSE Proximal NEK6 ;
ROSE Closest NEK6 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NEK6 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122300499 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers