SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122300458
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: KMS28BM
Genomic region: chr1:11907881-11910666
Size: 2785
Super-enhancer rank 458
Number of SE elements: 2
ChIP density(Case|Control): 27809.6175|1114.8355
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNU5E-1 ;
ROSE Overlap RNU5E-1 ;
ROSE Proximal KIAA2013 ; PLOD1 ; NPPB ;
ROSE Closest RNU5E-1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NPPB ; KIAA2013 ; NPPA ; NPPA-AS1 ; PLOD1 ; MFN2 ; RNU5E-1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122300458 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers