SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122300418
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: KMS28BM
Genomic region: chr4:13470387-13484704
Size: 14317
Super-enhancer rank 418
Number of SE elements: 4
ChIP density(Case|Control): 30054.2464|2080.2601
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RAB28 ;
ROSE Overlap RAB28 ;
ROSE Proximal RAB28 ; LINC01097 ;
ROSE Closest RAB28 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC01097 ; LINC01096 ; RAB28 ; NKX3-2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122300418 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers