SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122300240
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: KMS28BM
Genomic region: chr11:65585289-65591781
Size: 6492
Super-enhancer rank 240
Number of SE elements: 1
ChIP density(Case|Control): 40665.888|1651.5648
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KCNK7 ;
ROSE Overlap EHBP1L1 ;
ROSE Proximal LTBP3 ; PCNXL3 ; SIPA1 ; FAM89B ; MAP3K11 ; KCNK7 ; SSSCA1 ; SSSCA1-AS1 ; MIR4690 ;
ROSE Closest KCNK7 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MAP3K11 ; SIPA1 ; LTBP3 ; SCYL1 ; MIR4489 ; KCNK7 ; SSSCA1 ; MIR4690 ; RELA ; PCNXL3 ; FAM89B ; MALAT1 ; SSSCA1-AS1 ; EHBP1L1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122300240 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers