SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122300239
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: KMS28BM
Genomic region: chr16:11957947-11971473
Size: 13526
Super-enhancer rank 239
Number of SE elements: 6
ChIP density(Case|Control): 41132.566|2023.4896
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNFRSF17 ;
ROSE Overlap TNFRSF17 ;
ROSE Proximal GSPT1 ; SNX29 ;
ROSE Closest TNFRSF17 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GSPT1 ; TNFRSF17 ; SNX29 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122300239 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers