SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122200388
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: KMS12
Genomic region: chr16:2204681-2208377
Size: 3696
Super-enhancer rank 388
Number of SE elements: 1
ChIP density(Case|Control): 19786.536|634.2336
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MLST8 ;
ROSE Overlap MLST8 ;
ROSE Proximal CASKIN1 ; SNORD60 ; DNASE1L2 ; TRAF7 ; ECI1 ; MLST8 ; BRICD5 ; SNHG19 ; PGP ; E4F1 ;
ROSE Closest MLST8 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR3677 ; RNPS1 ; ECI1 ; BRICD5 ; MIR4717 ; MLST8 ; DNASE1L2 ; E4F1 ; PGP ; PKD1 ; MIR6511B1 ; SNORD60 ; MIR3180-5 ; TRAF7 ; CASKIN1 ; RAB26 ; MIR940 ; MIR4516 ; MIR6511B2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122200388 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers