SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122000670
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: JJN3
Genomic region: chr19:55640297-55644613
Size: 4316
Super-enhancer rank 670
Number of SE elements: 1
ChIP density(Case|Control): 21040.5|943.4776
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZNF580 ;
ROSE Overlap ZNF580 ; ZNF581 ;
ROSE Proximal EPN1 ; ZNF524 ; U2AF2 ; FIZ1 ; ZNF865 ; ZNF784 ; CCDC106 ;
ROSE Closest ZNF580 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ZNF524 ; ZNF581 ; U2AF2 ; EPN1 ; CCDC106 ; FIZ1 ; ZNF865 ; ZNF784 ; NLRP9 ; ZNF580 ; ZNF579 ; SBK3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122000670 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers