SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122000669
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: JJN3
Genomic region: chr1:155185270-155195547
Size: 10277
Super-enhancer rank 669
Number of SE elements: 2
ChIP density(Case|Control): 22941.3471|2808.7041
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MUC1 ;
ROSE Overlap MIR92B ; MUC1 ;
ROSE Proximal KRTCAP2 ; TRIM46 ; MUC1 ; SLC50A1 ; GBAP1 ; GBA ; DPM3 ; MTX1 ; THBS3 ;
ROSE Closest MUC1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MUC1 ; KRTCAP2 ; SCAMP3 ; EFNA1 ; TRIM46 ; SLC50A1 ; HCN3 ; MTX1 ; CLK2 ; GBA ; DPM3 ; FAM189B ; THBS3 ; GBAP1 ; MIR92B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122000669 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers