SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_122000610
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: JJN3
Genomic region: chr1:6024629-6029050
Size: 4421
Super-enhancer rank 610
Number of SE elements: 1
ChIP density(Case|Control): 22525.4371|1097.2922
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KCNAB2 ;
ROSE Overlap KCNAB2 ;
ROSE Proximal KCNAB2 ; NPHP4 ;
ROSE Closest KCNAB2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NPHP4 ; KCNAB2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122000610 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers