SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_122000546
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: JJN3
Genomic region: chr8:144426183-144430152
Size: 3969
Super-enhancer rank 546
Number of SE elements: 1
ChIP density(Case|Control): 24509.3688|1438.7625
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VPS28;
ROSE Overlap TONSL; VPS28;
ROSE Proximal KIFC2; CYHR1; CPSF1; MIR6893; TONSL-AS1; SLC39A4; MIR939; MIR6849; MIR1234; FOXH1;
ROSE Closest VPS28;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122000546 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers