SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122000544
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: JJN3
Genomic region: chr11:310033-332188
Size: 22155
Super-enhancer rank 544
Number of SE elements: 5
ChIP density(Case|Control): 25721.955|2634.2295
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IFITM3 ;
ROSE Overlap IFITM3 ; IFITM1 ;
ROSE Proximal ATHL1 ; B4GALNT4 ; IFITM5 ; NLRP6 ; IFITM2 ;
ROSE Closest IFITM3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PSMD13 ; IFITM1 ; SIGIRR ; PKP3 ; SIRT3 ; NLRP6 ; ATHL1 ; B4GALNT4 ; IFITM5 ; IFITM3 ; IFITM2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122000544 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers