SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122000511
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: JJN3
Genomic region: chr5:176533559-176537951
Size: 4392
Super-enhancer rank 511
Number of SE elements: 1
ChIP density(Case|Control): 24834.564|1010.16
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNF44 ;
ROSE Overlap RNF44 ;
ROSE Proximal CDHR2 ;
ROSE Closest RNF44 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SNCB ; RNF44 ; GPRIN1 ; FAF2 ; MIR4281 ; EIF4E1B ; CDHR2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122000511 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers