SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_122000124
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: JJN3
Genomic region: chr19:16582549-16605995
Size: 23446
Super-enhancer rank 124
Number of SE elements: 6
ChIP density(Case|Control): 53829.6714|4028.0228
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC35E1 ;
ROSE Overlap MED26 ;
ROSE Proximal CHERP ; SLC35E1 ;
ROSE Closest SLC35E1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SMIM7 ; C19orf44 ; CHERP ; SLC35E1 ; TMEM38A ; CALR3 ; MED26 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122000124 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers