SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_121300675
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Brain
Biosample name: GBM31
Genomic region: chr3:47394403-47443997
Size: 49594
Super-enhancer rank 675
Number of SE elements: 16
ChIP density(Case|Control): 31328.5298|4736.227
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PTPN23;
ROSE Overlap SCAP; PTPN23;
ROSE Proximal PTPN23;
ROSE Closest PTPN23;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_121300675 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers