SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_121100587
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Brain
Biosample name: GBM21
Genomic region: chr9:8842696-8878770
Size: 36074
Super-enhancer rank 587
Number of SE elements: 13
ChIP density(Case|Control): 14292.5188|1551.182
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PTPRD-AS1;
ROSE Overlap PTPRD-AS1; PTPRD;
ROSE Proximal ;
ROSE Closest PTPRD-AS1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_121100587 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers