SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_120500539
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Brain
Biosample name: NB3
Genomic region: chr3:129460771-129520467
Size: 59696
Super-enhancer rank 539
Number of SE elements: 25
ChIP density(Case|Control): 29764.4256|5933.7824
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RHO;
ROSE Overlap IFT122;
ROSE Proximal H1FOO; IFT122; MBD4; EFCAB12; RHO;
ROSE Closest RHO;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_120500539 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers