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Super-enhancer overview

SE ID: SE_02_119701013
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Brain
Biosample name: GBM33
Genomic region: chr5:141475516-141478975
Size: 3459
Super-enhancer rank 1013
Number of SE elements: 1
ChIP density(Case|Control): 16553.3904|398.4768
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PCDHGC3;
ROSE Overlap PCDHGB5; PCDHGA4; PCDHGA7; PCDHGB1; PCDHGA10; PCDHGA5; PCDHGC3; PCDHGA1; PCDHGA12; PCDHGB7; PCDHGA3; PCDHGA8; PCDHGA6; PCDHGB3; PCDHGB2; PCDHGA9; PCDHGA11; PCDHGB6; PCDHGA2; PCDHGB4;
ROSE Proximal PCDHGC5; PCDHGC4; PCDHGA12; PCDHGB8P;
ROSE Closest PCDHGC3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_119701013 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers