SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_118500456
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Brain
Biosample name: GBM14
Genomic region: chr12:57118625-57160326
Size: 41701
Super-enhancer rank 456
Number of SE elements: 13
ChIP density(Case|Control): 31192.348|4691.3625
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LRP1-AS ;
ROSE Overlap LRP1 ; LRP1-AS ;
ROSE Proximal STAT6 ; NEMP1 ; MIR1228 ; NAB2 ;
ROSE Closest LRP1-AS ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SHMT2 ; NXPH4 ; STAT6 ; NAB2 ; MYO1A ; TMEM194A ; MIR1228 ; LRP1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_118500456 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers