SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_118500353
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Brain
Biosample name: GBM14
Genomic region: chr2:219277687-219291601
Size: 13914
Super-enhancer rank 353
Number of SE elements: 3
ChIP density(Case|Control): 31996.6344|2091.2742
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DNAJB2 ;
ROSE Overlap DNAJB2 ; PTPRN ;
ROSE Proximal TUBA4A ; ATG9A ; GLB1L ; STK16 ; MIR153-1 ; RESP18 ; TUBA4B ; ANKZF1 ; PTPRN ;
ROSE Closest DNAJB2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA STK16 ; ATG9A ; GLB1L ; RESP18 ; ABCB6 ; DNAJB2 ; ZFAND2B ; ANKZF1 ; PTPRN ; MIR153-1 ; TUBA4B ; TUBA4A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_118500353 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers