SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_116801116
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Biliary
Biosample name: H69_TGF Vehicle_2
Genomic region: chr3:48423841-48438183
Size: 14342
Super-enhancer rank 1116
Number of SE elements: 5
ChIP density(Case|Control): 21362.409|1729.6452
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLXNB1;
ROSE Overlap PLXNB1; CCDC51;
ROSE Proximal TMA7; ATRIP; CCDC51; SHISA5; TREX1;
ROSE Closest PLXNB1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_116801116 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers