SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_116300016
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Embryonic kidney
Biosample name: HEK293 no dox
Genomic region: chr9:131366952-131423279
Size: 56327
Super-enhancer rank 16
Number of SE elements: 12
ChIP density(Case|Control): 37429.2915|7221.1214
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRRC2B;
ROSE Overlap ;
ROSE Proximal PRRC2B;
ROSE Closest PRRC2B;
Lasso UCK1; NUP214; POMT1; PPAPDC3; FAM78A;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_116300016 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers