SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_115900454
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF7
Genomic region: chr3:50258065-50274298
Size: 16233
Super-enhancer rank 454
Number of SE elements: 1
ChIP density(Case|Control): 48017.214|1822.9659
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SEMA3B-AS1;
ROSE Overlap SEMA3B; MIR6872; GNAI2; SEMA3B-AS1;
ROSE Proximal NAT6; HYAL1; HYAL2; IFRD2; MIR5787; SEMA3B; LSMEM2; HYAL3;
ROSE Closest SEMA3B-AS1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_115900454 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers