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Super-enhancer overview

SE ID: SE_02_115800116
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF7_siYTHDC1_E2
Genomic region: chr11:65468250-65494219
Size: 25969
Super-enhancer rank 116
Number of SE elements: 5
ChIP density(Case|Control): 34450.4754|628.4498
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MALAT1;
ROSE Overlap ;
ROSE Proximal SCYL1; NEAT1; MALAT1; MIR612;
ROSE Closest MALAT1;
Lasso SPDYC; SLC25A45; EHBP1L1; LTBP3; CAPN1; SSSCA1; SCYL1; FRMD8;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_115800116 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers