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Super-enhancer overview

SE ID: SE_02_115800077
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF7_siYTHDC1_E2
Genomic region: chr12:52964973-52993817
Size: 28844
Super-enhancer rank 77
Number of SE elements: 3
ChIP density(Case|Control): 43398.6824|957.6208
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EIF4B;
ROSE Overlap ;
ROSE Proximal KRT18; EIF4B; KRT8;
ROSE Closest EIF4B;
Lasso KRT18; KRT8; EIF4B; SPRYD3;
PreSTIGE EIF4B; KRT18; KRT8; LOC283335; SPRYD3;

Network diagram of super-enhancer and associated genes

Expression of SE_02_115800077 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers