SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_115000004
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Kidney
Biosample name: WT 9-12_Nrf2 knockout_vehicle
Genomic region: chr1:228630476-228642383
Size: 11907
Super-enhancer rank 4
Number of SE elements: 1
ChIP density(Case|Control): 379242.7128|75830.9202
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNA5S9;
ROSE Overlap RNA5S1;
ROSE Proximal RNA5S2; RNA5S3; RNA5S4; RHOU; RNA5S5; RNA5S6; MIR7641-2; RNA5S9; RNA5S10; DUSP5P1; RNA5S15;
ROSE Closest RNA5S9;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_115000004 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers