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Super-enhancer overview

SE ID: SE_02_113800197
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Retinal Pigmented Epithelial
Biosample name: RPE1-prometaphase
Genomic region: chr1:36133603-36188413
Size: 54810
Super-enhancer rank 197
Number of SE elements: 13
ChIP density(Case|Control): 36667.89|2795.31
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRAPPC3;
ROSE Overlap TRAPPC3; MAP7D1;
ROSE Proximal ADPRHL2; MAP7D1; TRAPPC3; COL8A2; TEKT2; THRAP3;
ROSE Closest TRAPPC3;
Lasso TRAPPC3; MAP7D1; THRAP3; COL8A2; LSM10;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113800197 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers