SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_113700613
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Retinal Pigmented Epithelial
Biosample name: RPE1-interphase
Genomic region: chr8:23719710-23763130
Size: 43420
Super-enhancer rank 613
Number of SE elements: 12
ChIP density(Case|Control): 28995.876|3108.872
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NKX3-1;
ROSE Overlap ;
ROSE Proximal NKX3-1; NKX2-6;
ROSE Closest NKX2-6;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113700613 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers