SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_113100267
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Pancreas
Biosample name: T3M4 wt
Genomic region: chr17:42666809-42680364
Size: 13555
Super-enhancer rank 267
Number of SE elements: 9
ChIP density(Case|Control): 27776.906|664.195
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLEKHH3 ;
ROSE Overlap PLEKHH3 ; CCR10 ; TUBG2 ;
ROSE Proximal CNTNAP1 ; MIR6780A ;
ROSE Closest PLEKHH3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CNTNAP1 ; PSMC3IP ; FAM134C ; MIR6780A ; PLEKHH3 ; CCR10 ; RAMP2-AS1 ; EZH1 ; RAMP2 ; VPS25 ; TUBG2 ; TUBG1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113100267 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers