SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_113000824
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr12:57520868-57525190
Size: 4322
Super-enhancer rank 824
Number of SE elements: 1
ChIP density(Case|Control): 22652.8986|836.7392
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MBD6 ;
ROSE Overlap MBD6 ;
ROSE Proximal MARS ; DCTN2 ; DDIT3 ; ARHGAP9 ; KIF5A ; MIR616 ; MIR6758 ;
ROSE Closest MBD6 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ARHGAP9 ; DDIT3 ; ARHGEF25 ; LOC101927583 ; MBD6 ; SLC26A10 ; DCTN2 ; PIP4K2C ; DTX3 ; KIF5A ; MARS ; GLI1 ; INHBE ; INHBC ; MIR616 ; MIR6758 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000824 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers