SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_113000773
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr16:28811811-28825607
Size: 13796
Super-enhancer rank 773
Number of SE elements: 3
ChIP density(Case|Control): 24205.082|1683.112
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ATXN2L ;
ROSE Overlap ATXN2L ;
ROSE Proximal SH2B1 ; ATXN2L ; TUFM ; MIR4721 ;
ROSE Closest ATXN2L ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ATP2A1-AS1 ; ATP2A1 ; ATXN2L ; SH2B1 ; MIR6862-2 ; MIR6862-1 ; NPIPB9 ; TUFM ; MIR4721 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000773 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers