SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_113000728
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr19:2262169-2274349
Size: 12180
Super-enhancer rank 728
Number of SE elements: 5
ChIP density(Case|Control): 25094.454|1981.686
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: OAZ1 ;
ROSE Overlap OAZ1 ;
ROSE Proximal SF3A2 ; PLEKHJ1 ; C19orf35 ; MIR1227 ; MIR6789 ; AMH ; JSRP1 ; MIR4321 ; LINGO3 ;
ROSE Closest OAZ1 ;
Lasso ;
PreSTIGE ;
ABC C19orf35 ; OAZ1 ; AMH ; SF3A2 ; PLEKHJ1 ;
BETA JSRP1 ; OAZ1 ; MIR4321 ; SPPL2B ; MIR1227 ; MIR6789 ; SF3A2 ; LINGO3 ; LSM7 ; PLEKHJ1 ; C19orf35 ; AMH ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000728 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers