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Super-enhancer overview

SE ID: SE_02_113000708
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr12:53352811-53379538
Size: 26727
Super-enhancer rank 708
Number of SE elements: 11
ChIP density(Case|Control): 27408.5385|3720.3984
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SP1 ;
ROSE Overlap ;
ROSE Proximal SP1 ; SP7 ; AAAS ; AMHR2 ;
ROSE Closest SP1 ;
Lasso AAAS ; PFDN5 ; AMHR2 ; C12orf10 ; SP1 ; PCBP2 ; PRR13 ;
PreSTIGE ;
ABC ;
BETA PCBP2 ; AMHR2 ; SP1 ; PCBP2-OT1 ; SP7 ; AAAS ; PFDN5 ; PRR13 ; C12orf10 ; ESPL1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000708 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers