SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_113000635
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr6_GL000250v2_alt:3127138-3169745
Size: 42607
Super-enhancer rank 635
Number of SE elements: 18
ChIP density(Case|Control): 27835.1531|2765.1943
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ;
ROSE Overlap HSPA1B ; HSPA1L ; C6orf48 ; SNORD48 ; HSPA1A ; VARS ; SNORD52 ; LSM2 ;
ROSE Proximal ;
ROSE Closest VARS ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000635 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers