SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_113000570
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr5:154833173-154860064
Size: 26891
Super-enhancer rank 570
Number of SE elements: 5
ChIP density(Case|Control): 30865.4898|4160.0377
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FAXDC2 ;
ROSE Overlap CNOT8 ; FAXDC2 ;
ROSE Proximal MIR378H ; CNOT8 ;
ROSE Closest FAXDC2 ;
Lasso GEMIN5 ;
PreSTIGE ;
ABC ;
BETA MRPL22 ; CNOT8 ; GEMIN5 ; MIR378H ; FAXDC2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000570 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers