SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_113000537
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr11:349232-356513
Size: 7281
Super-enhancer rank 537
Number of SE elements: 1
ChIP density(Case|Control): 28861.884|1231.9452
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: B4GALNT4 ;
ROSE Overlap ;
ROSE Proximal B4GALNT4 ; PKP3 ; IFITM5 ; IFITM2 ; IFITM1 ; IFITM3 ;
ROSE Closest B4GALNT4 ;
Lasso ;
PreSTIGE ;
ABC IFITM2 ; PGGHG ; PTDSS2 ; PKP3 ; IFITM3 ; ODF3 ; BET1L ; IFITM1 ; RIC8A ; SIRT3 ; PSMD13 ;
BETA IFITM1 ; SIGIRR ; PKP3 ; NLRP6 ; ATHL1 ; B4GALNT4 ; IFITM5 ; PTDSS2 ; IFITM3 ; ANO9 ; IFITM2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000537 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers