SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_113000520
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr5:1181462-1201949
Size: 20487
Super-enhancer rank 520
Number of SE elements: 5
ChIP density(Case|Control): 31062.3894|3023.8812
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC6A19 ;
ROSE Overlap SLC6A19 ;
ROSE Proximal CTD-3080P12.3 ; SLC6A18 ;
ROSE Closest SLC6A19 ;
Lasso SLC12A7 ; SLC6A18 ; SLC6A19 ;
PreSTIGE ;
ABC SLC6A19 ; CTD-3080P12.3 ; LOC105374620 ; LOC728613 ; SDHAP3 ; LPCAT1 ; LINC01511 ; ZDHHC11 ; LOC100506688 ; TERT ; CLPTM1L ; TPPP ;
BETA SLC6A18 ; CTD-3080P12.3 ; SLC12A7 ; SLC6A19 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000520 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers