SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_113000477
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr6:133953179-133973672
Size: 20493
Super-enhancer rank 477
Number of SE elements: 3
ChIP density(Case|Control): 32819.5395|3819.8952
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TBPL1 ;
ROSE Overlap TBPL1 ;
ROSE Proximal ;
ROSE Closest TBPL1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TBPL1 ; TARID ; TCF21 ; SLC2A12 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000477 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers