SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_113000404
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr12:30055-57681
Size: 27626
Super-enhancer rank 404
Number of SE elements: 7
ChIP density(Case|Control): 35513.223|3944.9928
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC100288778 ;
ROSE Overlap FAM138D ; LOC100288778 ;
ROSE Proximal IQSEC3 ;
ROSE Closest LOC100288778 ;
Lasso IQSEC3 ;
PreSTIGE ;
ABC ;
BETA FAM138D ; IQSEC3 ; LOC100288778 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000404 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers