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Super-enhancer overview

SE ID: SE_02_113000354
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr4:1852732-1885781
Size: 33049
Super-enhancer rank 354
Number of SE elements: 7
ChIP density(Case|Control): 38055.9235|4577.2865
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: WHSC1 ;
ROSE Overlap WHSC1 ; LETM1 ;
ROSE Proximal WHSC1 ;
ROSE Closest WHSC1 ;
Lasso ;
PreSTIGE ;
ABC LETM1 ; FGFR3 ; TACC3 ; TMEM129 ; NAT8L ; C4orf48 ; NELFA ; FAM53A ; LOC100130872 ;
BETA FGFR3 ; WHSC1 ; LETM1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000354 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers