SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_113000339
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr1:100344817-100366083
Size: 21266
Super-enhancer rank 339
Number of SE elements: 6
ChIP density(Case|Control): 38098.039|4000.1346
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDC14A ;
ROSE Overlap CDC14A ;
ROSE Proximal ;
ROSE Closest CDC14A ;
Lasso TRMT13 ; RTCA ; SASS6 ; CDC14A ;
PreSTIGE ;
ABC ;
BETA RTCA ; CDC14A ; RTCA-AS1 ; MIR553 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000339 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers